No. words: 1099; after pruning: 1073


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.1 (1,1:504)  484  0.00 0.40 0.40  BE490304Ta13P016B05P052C051F1_024.ab1        2   506 (55)  C BE490304Ta13P016B05P052C051R1_024.ab1   (33)   505     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  242 nodes

 123 str. conn. components

Path
    1  C BE490304Ta13P016B05P052C051R1_024.ab1   538 
   56    BE490304Ta13P016B05P052C051F1_024.ab1    22 
   60  C BE490304Ta13P016B05P052C051R1_024.ab1   479 
   72    BE490304Ta13P016B05P052C051F1_024.ab1    38 
   92  C BE490304Ta13P016B05P052C051R1_024.ab1   447 
   96    BE490304Ta13P016B05P052C051F1_024.ab1    62 
  184  C BE490304Ta13P016B05P052C051R1_024.ab1   355 
  188    BE490304Ta13P016B05P052C051F1_024.ab1   154 
  324  C BE490304Ta13P016B05P052C051R1_024.ab1   215 
  384    BE490304Ta13P016B05P052C051F1_024.ab1   350 
  388  C BE490304Ta13P016B05P052C051R1_024.ab1   151 
  420    BE490304Ta13P016B05P052C051F1_024.ab1   386 
  424  C BE490304Ta13P016B05P052C051R1_024.ab1   115 
  496    BE490304Ta13P016B05P052C051F1_024.ab1   462 
Contig length: old 594, new 595

Contig length: old 595, new 595
New start: 0