No. words: 1086; after pruning: 1060


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.8 (1,1:501)  480  0.40 0.40 0.20  BE490304Ta17P016B05P052C051F1_047.ab1        1   502 (57)  C BE490304Ta17P016B05P052C051R1_047.ab1   (24)   503     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  238 nodes

 121 str. conn. components

Path
    1  C BE490304Ta17P016B05P052C051R1_047.ab1   527 
   47    BE490304Ta17P016B05P052C051F1_047.ab1    21 
   51  C BE490304Ta17P016B05P052C051R1_047.ab1   477 
   55    BE490304Ta17P016B05P052C051F1_047.ab1    29 
  291  C BE490304Ta17P016B05P052C051R1_047.ab1   237 
  295    BE490304Ta17P016B05P052C051F1_047.ab1   269 
  307  C BE490304Ta17P016B05P052C051R1_047.ab1   221 
  311    BE490304Ta17P016B05P052C051F1_047.ab1   285 
  315  C BE490304Ta17P016B05P052C051R1_047.ab1   213 
  431    BE490304Ta17P016B05P052C051F1_047.ab1   405 
  435  C BE490304Ta17P016B05P052C051R1_047.ab1    93 
  475    BE490304Ta17P016B05P052C051F1_047.ab1   449 
  494  C BE490304Ta17P016B05P052C051R1_047.ab1    34 
  498    BE490304Ta17P016B05P052C051F1_047.ab1   472 
Contig length: old 584, new 585

Contig length: old 585, new 585
New start: 0