No. words: 1087; after pruning: 1061


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 3.0 (1,1:502)  482  0.00 0.40 0.40  BE490304Ta18P016B05P052C051F1_045.ab1        2   504 (47)  C BE490304Ta18P016B05P052C051R1_045.ab1   (33)   503     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  242 nodes

 123 str. conn. components

Path
    1  C BE490304Ta18P016B05P052C051R1_045.ab1   536 
   56    BE490304Ta18P016B05P052C051F1_045.ab1    22 
   92  C BE490304Ta18P016B05P052C051R1_045.ab1   445 
   96    BE490304Ta18P016B05P052C051F1_045.ab1    62 
  200  C BE490304Ta18P016B05P052C051R1_045.ab1   337 
  204    BE490304Ta18P016B05P052C051F1_045.ab1   170 
  328  C BE490304Ta18P016B05P052C051R1_045.ab1   209 
  496    BE490304Ta18P016B05P052C051F1_045.ab1   462 
  500  C BE490304Ta18P016B05P052C051R1_045.ab1    37 
  504    BE490304Ta18P016B05P052C051F1_045.ab1   470 
Contig length: old 584, new 585

Contig length: old 585, new 585
New start: 0