No. words: 1091; after pruning: 1065


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.4 (1,1:499)  481  0.20 0.40 0.20  BE490304Ta19P016B05P052C051F1_043.ab1        1   500 (51)  C BE490304Ta19P016B05P052C051R1_043.ab1   (39)   501     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  240 nodes

 122 str. conn. components

Path
    1  C BE490304Ta19P016B05P052C051R1_043.ab1   540 
   59    BE490304Ta19P016B05P052C051F1_043.ab1    18 
   95  C BE490304Ta19P016B05P052C051R1_043.ab1   446 
   99    BE490304Ta19P016B05P052C051F1_043.ab1    58 
  111  C BE490304Ta19P016B05P052C051R1_043.ab1   430 
  115    BE490304Ta19P016B05P052C051F1_043.ab1    74 
  146  C BE490304Ta19P016B05P052C051R1_043.ab1   395 
  150    BE490304Ta19P016B05P052C051F1_043.ab1   109 
  174  C BE490304Ta19P016B05P052C051R1_043.ab1   367 
  178    BE490304Ta19P016B05P052C051F1_043.ab1   137 
  302  C BE490304Ta19P016B05P052C051R1_043.ab1   239 
  370    BE490304Ta19P016B05P052C051F1_043.ab1   329 
  374  C BE490304Ta19P016B05P052C051R1_043.ab1   167 
  502    BE490304Ta19P016B05P052C051F1_043.ab1   461 
  506  C BE490304Ta19P016B05P052C051R1_043.ab1    35 
  514    BE490304Ta19P016B05P052C051F1_043.ab1   473 
  518  C BE490304Ta19P016B05P052C051R1_043.ab1    23 
  526    BE490304Ta19P016B05P052C051F1_043.ab1   485 
Contig length: old 591, new 592

Contig length: old 592, new 592
New start: 0