No. words: 1414; after pruning: 1388


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 11.3 (1,1:722)  623  0.00 0.16 0.00  BE490613As01P129F04P129F101F1_095.ab1        3   640 (2)  C BE490613As01P129F04P129F101R1_095.ab1   (50)   722    84 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  318 nodes

 161 str. conn. components

Path
    1  C BE490613As01P129F04P129F101R1_095.ab1   772 
   73    BE490613As01P129F04P129F101F1_095.ab1    24 
   77  C BE490613As01P129F04P129F101R1_095.ab1   696 
   81    BE490613As01P129F04P129F101F1_095.ab1    32 
   93  C BE490613As01P129F04P129F101R1_095.ab1   680 
   97    BE490613As01P129F04P129F101F1_095.ab1    48 
  101  C BE490613As01P129F04P129F101R1_095.ab1   672 
  109    BE490613As01P129F04P129F101F1_095.ab1    60 
  137  C BE490613As01P129F04P129F101R1_095.ab1   636 
  157    BE490613As01P129F04P129F101F1_095.ab1   108 
  181  C BE490613As01P129F04P129F101R1_095.ab1   592 
  193    BE490613As01P129F04P129F101F1_095.ab1   144 
  201  C BE490613As01P129F04P129F101R1_095.ab1   572 
  217    BE490613As01P129F04P129F101F1_095.ab1   168 
  265  C BE490613As01P129F04P129F101R1_095.ab1   508 
  301    BE490613As01P129F04P129F101F1_095.ab1   252 
  353  C BE490613As01P129F04P129F101R1_095.ab1   420 
  369    BE490613As01P129F04P129F101F1_095.ab1   320 
  377  C BE490613As01P129F04P129F101R1_095.ab1   396 
  385    BE490613As01P129F04P129F101F1_095.ab1   336 
  397  C BE490613As01P129F04P129F101R1_095.ab1   376 
  497    BE490613As01P129F04P129F101F1_095.ab1   448 
  517  C BE490613As01P129F04P129F101R1_095.ab1   256 
  609    BE490613As01P129F04P129F101F1_095.ab1   560 
  641  C BE490613As01P129F04P129F101R1_095.ab1   132 
  657    BE490613As01P129F04P129F101F1_095.ab1   608 
  661  C BE490613As01P129F04P129F101R1_095.ab1   112 
  681    BE490613As01P129F04P129F101F1_095.ab1   632 
  685  C BE490613As01P129F04P129F101R1_095.ab1    88 
Contig length: old 772, new 772

Contig length: old 772, new 772
New start: 0