No. words: 1546; after pruning: 1520


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.4 (1,1:730)  705  0.00 0.27 0.14  BE490613As02P129F04P129F101F1_093.ab1        1   731 (43)  C BE490613As02P129F04P129F101R1_093.ab1   (40)   732     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  356 nodes

 180 str. conn. components

Path
    1  C BE490613As02P129F04P129F101R1_093.ab1   772 
   76    BE490613As02P129F04P129F101F1_093.ab1    34 
   84  C BE490613As02P129F04P129F101R1_093.ab1   689 
   88    BE490613As02P129F04P129F101F1_093.ab1    46 
  196  C BE490613As02P129F04P129F101R1_093.ab1   577 
  540    BE490613As02P129F04P129F101F1_093.ab1   498 
  620  C BE490613As02P129F04P129F101R1_093.ab1   153 
  660    BE490613As02P129F04P129F101F1_093.ab1   618 
  676  C BE490613As02P129F04P129F101R1_093.ab1    97 
  720    BE490613As02P129F04P129F101F1_093.ab1   678 
  728  C BE490613As02P129F04P129F101R1_093.ab1    45 
  748    BE490613As02P129F04P129F101F1_093.ab1   706 
Contig length: old 815, new 816

Contig length: old 816, new 816
New start: 0