No. words: 1418; after pruning: 1392


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 12.6 (1,1:661)  643  0.00 0.15 0.00  BE490613At01P129F04P129F101F1_091.ab1        3   662 (53)  C BE490613At01P129F04P129F101R1_091.ab1   (42)   661     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  328 nodes

 166 str. conn. components

Path
    1  C BE490613At01P129F04P129F101R1_091.ab1   703 
  105    BE490613At01P129F04P129F101F1_091.ab1    64 
  117  C BE490613At01P129F04P129F101R1_091.ab1   587 
  541    BE490613At01P129F04P129F101F1_091.ab1   500 
  605  C BE490613At01P129F04P129F101R1_091.ab1    99 
  613    BE490613At01P129F04P129F101F1_091.ab1   572 
  637  C BE490613At01P129F04P129F101R1_091.ab1    67 
  641    BE490613At01P129F04P129F101F1_091.ab1   600 
  649  C BE490613At01P129F04P129F101R1_091.ab1    55 
  657    BE490613At01P129F04P129F101F1_091.ab1   616 
  661  C BE490613At01P129F04P129F101R1_091.ab1    43 
  669    BE490613At01P129F04P129F101F1_091.ab1   628 
  681  C BE490613At01P129F04P129F101R1_091.ab1    23 
  685    BE490613At01P129F04P129F101F1_091.ab1   644 
Contig length: old 756, new 756

Contig length: old 756, new 756
New start: 0