No. words: 1726; after pruning: 1700 Histogram of relative pair offsets, for read pairs with multiple alignments: Pass 1 Gap Score Pass: 1 #reads #contigs (not counting singlets) 1 2 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Pass 3 Gap Score Merge:(0) 0 0.0 15.3 (1,1:697) 676 0.29 0.00 0.00 BE490613Ld09P129F04P129F101F1_064.ab1 1 698 (146) C BE490613Ld09P129F04P129F101R1_064.ab1 (184) 698 1 * Pass: 3 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score 0.0 1 0 Gap # merges # failures size 0 1 0 Offset 0 1 Pass 4 Gap Score Pass: 4 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Read equivalence class histogram: 2 1 Chimera merges: Contig 1: 342 nodes 173 str. conn. components Path 1 C BE490613Ld09P129F04P129F101R1_064.ab1 882 217 BE490613Ld09P129F04P129F101F1_064.ab1 33 221 C BE490613Ld09P129F04P129F101R1_064.ab1 662 229 BE490613Ld09P129F04P129F101F1_064.ab1 45 249 C BE490613Ld09P129F04P129F101R1_064.ab1 634 329 BE490613Ld09P129F04P129F101F1_064.ab1 145 333 C BE490613Ld09P129F04P129F101R1_064.ab1 550 341 BE490613Ld09P129F04P129F101F1_064.ab1 157 353 C BE490613Ld09P129F04P129F101R1_064.ab1 530 357 BE490613Ld09P129F04P129F101F1_064.ab1 173 529 C BE490613Ld09P129F04P129F101R1_064.ab1 354 541 BE490613Ld09P129F04P129F101F1_064.ab1 357 549 C BE490613Ld09P129F04P129F101R1_064.ab1 334 557 BE490613Ld09P129F04P129F101F1_064.ab1 373 577 C BE490613Ld09P129F04P129F101R1_064.ab1 306 605 BE490613Ld09P129F04P129F101F1_064.ab1 421 Contig length: old 1028, new 1028 Contig length: old 1028, new 1028 New start: 0