No. words: 1058; after pruning: 1032


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.8 (1,1:485)  461  0.00 0.21 0.41  BE490613Sn24P129F04P146C081F1_026.ab1        1   487 (43)  C BE490613Sn24P129F04P146C081R1_026.ab1   (42)   486     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  234 nodes

 119 str. conn. components

Path
    1  C BE490613Sn24P129F04P146C081R1_026.ab1   528 
  181    BE490613Sn24P129F04P146C081F1_026.ab1   138 
  189  C BE490613Sn24P129F04P146C081R1_026.ab1   340 
  265    BE490613Sn24P129F04P146C081F1_026.ab1   222 
Contig length: old 572, new 573

Contig length: old 573, new 573
New start: 0