No. words: 1041; after pruning: 1015


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 8.5 (1,1:479)  443  0.21 0.63 0.21  BE490613Sn24P146A08P129F101F1_026.ab1        5   480 (44)  C BE490613Sn24P146A08P129F101R1_026.ab1   (39)   478     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  224 nodes

 114 str. conn. components

Path
    1  C BE490613Sn24P146A08P129F101R1_026.ab1   517 
   61    BE490613Sn24P146A08P129F101F1_026.ab1    24 
   65  C BE490613Sn24P146A08P129F101R1_026.ab1   453 
   78    BE490613Sn24P146A08P129F101F1_026.ab1    40 
  102  C BE490613Sn24P146A08P129F101R1_026.ab1   416 
  122    BE490613Sn24P146A08P129F101F1_026.ab1    84 
  126  C BE490613Sn24P146A08P129F101R1_026.ab1   392 
  134    BE490613Sn24P146A08P129F101F1_026.ab1    96 
Contig length: old 561, new 562

Contig length: old 562, new 562
New start: 0