No. words: 1048; after pruning: 1022


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.3 (1,1:479)  460  0.00 0.21 0.21  BE490613Sn30P129F04P146C081F1_020.ab1        1   480 (47)  C BE490613Sn30P129F04P146C081R1_020.ab1   (41)   480     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  236 nodes

 120 str. conn. components

Path
    1  C BE490613Sn30P129F04P146C081R1_020.ab1   521 
  111    BE490613Sn30P129F04P146C081F1_020.ab1    69 
  119  C BE490613Sn30P129F04P146C081R1_020.ab1   403 
  295    BE490613Sn30P129F04P146C081F1_020.ab1   253 
  319  C BE490613Sn30P129F04P146C081R1_020.ab1   203 
  339    BE490613Sn30P129F04P146C081F1_020.ab1   297 
  367  C BE490613Sn30P129F04P146C081R1_020.ab1   155 
  375    BE490613Sn30P129F04P146C081F1_020.ab1   333 
Contig length: old 568, new 569

Contig length: old 569, new 569
New start: 0