No. words: 1059; after pruning: 1033


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.5 (1,1:486)  466  0.00 0.21 0.21  BE490613Sn31P129F04P146C081F1_017.ab1        1   487 (43)  C BE490613Sn31P129F04P146C081R1_017.ab1   (42)   487     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  240 nodes

 122 str. conn. components

Path
    1  C BE490613Sn31P129F04P146C081R1_017.ab1   529 
   93    BE490613Sn31P129F04P146C081F1_017.ab1    50 
   97  C BE490613Sn31P129F04P146C081R1_017.ab1   433 
  261    BE490613Sn31P129F04P146C081F1_017.ab1   218 
  277  C BE490613Sn31P129F04P146C081R1_017.ab1   253 
  293    BE490613Sn31P129F04P146C081F1_017.ab1   250 
  321  C BE490613Sn31P129F04P146C081R1_017.ab1   209 
  329    BE490613Sn31P129F04P146C081F1_017.ab1   286 
  365  C BE490613Sn31P129F04P146C081R1_017.ab1   165 
  397    BE490613Sn31P129F04P146C081F1_017.ab1   354 
  409  C BE490613Sn31P129F04P146C081R1_017.ab1   121 
  421    BE490613Sn31P129F04P146C081F1_017.ab1   378 
Contig length: old 572, new 573

Contig length: old 573, new 573
New start: 0