No. words: 1029; after pruning: 1003


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 8.9 (1,1:452)  434  0.00 0.22 0.00  BE490613Sn31P146A08P129F101F1_017.ab1        4   453 (61)  C BE490613Sn31P146A08P129F101R1_017.ab1   (64)   451     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  220 nodes

 112 str. conn. components

Path
    1  C BE490613Sn31P146A08P129F101R1_017.ab1   515 
  108    BE490613Sn31P146A08P129F101F1_017.ab1    46 
  112  C BE490613Sn31P146A08P129F101R1_017.ab1   404 
  152    BE490613Sn31P146A08P129F101F1_017.ab1    90 
  168  C BE490613Sn31P146A08P129F101R1_017.ab1   348 
  196    BE490613Sn31P146A08P129F101F1_017.ab1   134 
  312  C BE490613Sn31P146A08P129F101R1_017.ab1   204 
  324    BE490613Sn31P146A08P129F101F1_017.ab1   262 
  344  C BE490613Sn31P146A08P129F101R1_017.ab1   172 
  352    BE490613Sn31P146A08P129F101F1_017.ab1   290 
  400  C BE490613Sn31P146A08P129F101R1_017.ab1   116 
  424    BE490613Sn31P146A08P129F101F1_017.ab1   362 
Contig length: old 576, new 576

Contig length: old 576, new 576
New start: 0