No. words: 1028; after pruning: 1002


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 8.7 (1,1:462)  438  0.00 0.44 0.00  BE490613Ta11P146A08P129F101F1_005.ab1        1   458 (62)  C BE490613Ta11P146A08P129F101R1_005.ab1   (44)   464     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  222 nodes

 113 str. conn. components

Path
    1  C BE490613Ta11P146A08P129F101R1_005.ab1   508 
   95    BE490613Ta11P146A08P129F101F1_005.ab1    49 
  103  C BE490613Ta11P146A08P129F101R1_005.ab1   406 
  143    BE490613Ta11P146A08P129F101F1_005.ab1    97 
  159  C BE490613Ta11P146A08P129F101R1_005.ab1   350 
  163    BE490613Ta11P146A08P129F101F1_005.ab1   117 
  335  C BE490613Ta11P146A08P129F101R1_005.ab1   174 
  339    BE490613Ta11P146A08P129F101F1_005.ab1   293 
  375  C BE490613Ta11P146A08P129F101R1_005.ab1   134 
  379    BE490613Ta11P146A08P129F101F1_005.ab1   333 
Contig length: old 565, new 566

Contig length: old 566, new 566
New start: 0