No. words: 1081; after pruning: 1055


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.8 (1,1:487)  464  0.20 0.20 0.20  BE490613Ta13P129F04P146C081F1_003.ab1        1   488 (52)  C BE490613Ta13P129F04P146C081R1_003.ab1   (53)   488     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  238 nodes

 121 str. conn. components

Path
    1  C BE490613Ta13P129F04P146C081R1_003.ab1   541 
  324    BE490613Ta13P129F04P146C081F1_003.ab1   270 
  332  C BE490613Ta13P129F04P146C081R1_003.ab1   210 
  336    BE490613Ta13P129F04P146C081F1_003.ab1   282 
  348  C BE490613Ta13P129F04P146C081R1_003.ab1   194 
  356    BE490613Ta13P129F04P146C081F1_003.ab1   302 
  368  C BE490613Ta13P129F04P146C081R1_003.ab1   174 
  372    BE490613Ta13P129F04P146C081F1_003.ab1   318 
  376  C BE490613Ta13P129F04P146C081R1_003.ab1   166 
  384    BE490613Ta13P129F04P146C081F1_003.ab1   330 
  388  C BE490613Ta13P129F04P146C081R1_003.ab1   154 
  400    BE490613Ta13P129F04P146C081F1_003.ab1   346 
  420  C BE490613Ta13P129F04P146C081R1_003.ab1   122 
  428    BE490613Ta13P129F04P146C081F1_003.ab1   374 
  444  C BE490613Ta13P129F04P146C081R1_003.ab1    98 
  452    BE490613Ta13P129F04P146C081F1_003.ab1   398 
  508  C BE490613Ta13P129F04P146C081R1_003.ab1    34 
  512    BE490613Ta13P129F04P146C081F1_003.ab1   458 
Contig length: old 593, new 594

Contig length: old 594, new 594
New start: 0