No. words: 1039; after pruning: 1013


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.5 (1,1:464)  444  0.00 0.43 0.00  BE490613Ta14P146A08P129F101F1_004.ab1        1   464 (56)  C BE490613Ta14P146A08P129F101R1_004.ab1   (53)   466     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  226 nodes

 115 str. conn. components

Path
    1  C BE490613Ta14P146A08P129F101R1_004.ab1   519 
  104    BE490613Ta14P146A08P129F101F1_004.ab1    49 
  112  C BE490613Ta14P146A08P129F101R1_004.ab1   408 
  148    BE490613Ta14P146A08P129F101F1_004.ab1    93 
  164  C BE490613Ta14P146A08P129F101R1_004.ab1   356 
  168    BE490613Ta14P146A08P129F101F1_004.ab1   113 
  192  C BE490613Ta14P146A08P129F101R1_004.ab1   328 
  196    BE490613Ta14P146A08P129F101F1_004.ab1   141 
  312  C BE490613Ta14P146A08P129F101R1_004.ab1   208 
  320    BE490613Ta14P146A08P129F101F1_004.ab1   265 
  344  C BE490613Ta14P146A08P129F101R1_004.ab1   176 
  352    BE490613Ta14P146A08P129F101F1_004.ab1   297 
  416  C BE490613Ta14P146A08P129F101R1_004.ab1   104 
  424    BE490613Ta14P146A08P129F101F1_004.ab1   369 
Contig length: old 574, new 575

Contig length: old 575, new 575
New start: 0