No. words: 1019; after pruning: 993


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.5 (1,1:441)  425  0.23 0.23 0.00  BE490613Ta16P146A08P129F101F1_002.ab1        1   442 (67)  C BE490613Ta16P146A08P129F101R1_002.ab1   (67)   443     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  216 nodes

 110 str. conn. components

Path
    1  C BE490613Ta16P146A08P129F101R1_002.ab1   510 
  117    BE490613Ta16P146A08P129F101F1_002.ab1    49 
  125  C BE490613Ta16P146A08P129F101R1_002.ab1   386 
  153    BE490613Ta16P146A08P129F101F1_002.ab1    85 
  165  C BE490613Ta16P146A08P129F101R1_002.ab1   346 
  173    BE490613Ta16P146A08P129F101F1_002.ab1   105 
  185  C BE490613Ta16P146A08P129F101R1_002.ab1   326 
  209    BE490613Ta16P146A08P129F101F1_002.ab1   141 
  253  C BE490613Ta16P146A08P129F101R1_002.ab1   258 
  257    BE490613Ta16P146A08P129F101F1_002.ab1   189 
  381  C BE490613Ta16P146A08P129F101R1_002.ab1   130 
  385    BE490613Ta16P146A08P129F101F1_002.ab1   317 
Contig length: old 577, new 577

Contig length: old 577, new 577
New start: 0