No. words: 1054; after pruning: 1028


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 2.5 (1,1:485)  461  0.00 0.21 0.41  BE490613Ta21P129F04P146C081F1_027.ab1        1   487 (39)  C BE490613Ta21P129F04P146C081R1_027.ab1   (42)   486     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  234 nodes

 119 str. conn. components

Path
    1  C BE490613Ta21P129F04P146C081R1_027.ab1   528 
  113    BE490613Ta21P129F04P146C081F1_027.ab1    70 
  121  C BE490613Ta21P129F04P146C081R1_027.ab1   408 
  297    BE490613Ta21P129F04P146C081F1_027.ab1   254 
  321  C BE490613Ta21P129F04P146C081R1_027.ab1   208 
  397    BE490613Ta21P129F04P146C081F1_027.ab1   354 
  409  C BE490613Ta21P129F04P146C081R1_027.ab1   120 
  461    BE490613Ta21P129F04P146C081F1_027.ab1   418 
Contig length: old 568, new 569

Contig length: old 569, new 569
New start: 0