No. words: 1076; after pruning: 1050


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 5.1 (1,1:483)  460  0.00 0.00 0.42  BE490613Td02P129F04P146C081F1_016.ab1        5   485 (53)  C BE490613Td02P129F04P146C081R1_016.ab1   (59)   479     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  234 nodes

 119 str. conn. components

Path
    1  C BE490613Td02P129F04P146C081R1_016.ab1   538 
   87    BE490613Td02P129F04P146C081F1_016.ab1    32 
   91  C BE490613Td02P129F04P146C081R1_016.ab1   448 
  115    BE490613Td02P129F04P146C081F1_016.ab1    60 
  127  C BE490613Td02P129F04P146C081R1_016.ab1   412 
  167    BE490613Td02P129F04P146C081F1_016.ab1   112 
  171  C BE490613Td02P129F04P146C081R1_016.ab1   368 
  271    BE490613Td02P129F04P146C081F1_016.ab1   216 
  275  C BE490613Td02P129F04P146C081R1_016.ab1   264 
  303    BE490613Td02P129F04P146C081F1_016.ab1   248 
  311  C BE490613Td02P129F04P146C081R1_016.ab1   228 
  319    BE490613Td02P129F04P146C081F1_016.ab1   264 
  327  C BE490613Td02P129F04P146C081R1_016.ab1   212 
  363    BE490613Td02P129F04P146C081F1_016.ab1   308 
  383  C BE490613Td02P129F04P146C081R1_016.ab1   156 
  395    BE490613Td02P129F04P146C081F1_016.ab1   340 
  403  C BE490613Td02P129F04P146C081R1_016.ab1   136 
  407    BE490613Td02P129F04P146C081F1_016.ab1   352 
  423  C BE490613Td02P129F04P146C081R1_016.ab1   116 
  427    BE490613Td02P129F04P146C081F1_016.ab1   372 
Contig length: old 592, new 593

Contig length: old 593, new 593
New start: 0