No. words: 1012; after pruning: 986


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.4 (1,1:447)  426  0.22 0.22 0.22  BE490613Td02P146A08P129F101F1_016.ab1        1   448 (56)  C BE490613Td02P146A08P129F101R1_016.ab1   (60)   448     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  214 nodes

 109 str. conn. components

Path
    1  C BE490613Td02P146A08P129F101R1_016.ab1   508 
  101    BE490613Td02P146A08P129F101F1_016.ab1    40 
  117  C BE490613Td02P146A08P129F101R1_016.ab1   392 
  125    BE490613Td02P146A08P129F101F1_016.ab1    64 
  129  C BE490613Td02P146A08P129F101R1_016.ab1   380 
  141    BE490613Td02P146A08P129F101F1_016.ab1    80 
  289  C BE490613Td02P146A08P129F101R1_016.ab1   220 
  317    BE490613Td02P146A08P129F101F1_016.ab1   256 
Contig length: old 564, new 565

Contig length: old 565, new 565
New start: 0