No. words: 1068; after pruning: 1042


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 6.3 (1,1:484)  465  0.00 0.00 0.21  BE490613Td03P129F04P146C081F1_013.ab1        5   485 (54)  C BE490613Td03P129F04P146C081R1_013.ab1   (49)   480     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  240 nodes

 122 str. conn. components

Path
    1  C BE490613Td03P129F04P146C081R1_013.ab1   529 
  429    BE490613Td03P129F04P146C081F1_013.ab1   384 
  465  C BE490613Td03P129F04P146C081R1_013.ab1    65 
  477    BE490613Td03P129F04P146C081F1_013.ab1   432 
Contig length: old 583, new 584

Contig length: old 584, new 584
New start: 0