No. words: 1068; after pruning: 1042


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.3 (1,1:485)  465  0.00 0.21 0.21  BE490613Td04P129F04P146C081F1_014.ab1        1   486 (53)  C BE490613Td04P129F04P146C081R1_014.ab1   (43)   486     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  240 nodes

 122 str. conn. components

Path
    1  C BE490613Td04P129F04P146C081R1_014.ab1   529 
   77    BE490613Td04P129F04P146C081F1_014.ab1    33 
   81  C BE490613Td04P129F04P146C081R1_014.ab1   449 
  297    BE490613Td04P129F04P146C081F1_014.ab1   253 
  389  C BE490613Td04P129F04P146C081R1_014.ab1   141 
  405    BE490613Td04P129F04P146C081F1_014.ab1   361 
Contig length: old 582, new 583

Contig length: old 583, new 583
New start: 0