No. words: 1066; after pruning: 1040


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 3.3 (1,1:482)  455  0.00 0.21 0.42  BE490613Td05P129F04P146C081F1_011.ab1        5   484 (53)  C BE490613Td05P129F04P146C081R1_011.ab1   (50)   479     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  230 nodes

 117 str. conn. components

Path
    1  C BE490613Td05P129F04P146C081R1_011.ab1   529 
   72    BE490613Td05P129F04P146C081F1_011.ab1    25 
  116  C BE490613Td05P129F04P146C081R1_011.ab1   414 
  124    BE490613Td05P129F04P146C081F1_011.ab1    77 
  172  C BE490613Td05P129F04P146C081R1_011.ab1   358 
  176    BE490613Td05P129F04P146C081F1_011.ab1   129 
  208  C BE490613Td05P129F04P146C081R1_011.ab1   322 
  212    BE490613Td05P129F04P146C081F1_011.ab1   165 
  416  C BE490613Td05P129F04P146C081R1_011.ab1   114 
  420    BE490613Td05P129F04P146C081F1_011.ab1   373 
Contig length: old 583, new 584

Contig length: old 584, new 584
New start: 0