No. words: 1060; after pruning: 1034


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.1 (1,1:487)  464  0.20 0.20 0.20  BE490613Td07P129F04P146C081F1_009.ab1        1   488 (42)  C BE490613Td07P129F04P146C081R1_009.ab1   (42)   488     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  238 nodes

 121 str. conn. components

Path
    1  C BE490613Td07P129F04P146C081R1_009.ab1   530 
  153    BE490613Td07P129F04P146C081F1_009.ab1   110 
  161  C BE490613Td07P129F04P146C081R1_009.ab1   370 
  197    BE490613Td07P129F04P146C081F1_009.ab1   154 
  201  C BE490613Td07P129F04P146C081R1_009.ab1   330 
  209    BE490613Td07P129F04P146C081F1_009.ab1   166 
  217  C BE490613Td07P129F04P146C081R1_009.ab1   314 
  381    BE490613Td07P129F04P146C081F1_009.ab1   338 
  385  C BE490613Td07P129F04P146C081R1_009.ab1   146 
  421    BE490613Td07P129F04P146C081F1_009.ab1   378 
Contig length: old 572, new 573

Contig length: old 573, new 573
New start: 0