No. words: 1505; after pruning: 1479


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.7 (1,1:712)  685  0.00 0.28 0.00  BE490613Tu02P129F04P129F101F1_066.ab1        1   712 (42)  C BE490613Tu02P129F04P129F101R1_066.ab1   (37)   714     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  352 nodes

 178 str. conn. components

Path
    1  C BE490613Tu02P129F04P129F101R1_066.ab1   751 
   78    BE490613Tu02P129F04P129F101F1_066.ab1    39 
   82  C BE490613Tu02P129F04P129F101R1_066.ab1   670 
   86    BE490613Tu02P129F04P129F101F1_066.ab1    47 
   90  C BE490613Tu02P129F04P129F101R1_066.ab1   662 
  102    BE490613Tu02P129F04P129F101F1_066.ab1    63 
  114  C BE490613Tu02P129F04P129F101R1_066.ab1   638 
  166    BE490613Tu02P129F04P129F101F1_066.ab1   127 
  182  C BE490613Tu02P129F04P129F101R1_066.ab1   570 
  206    BE490613Tu02P129F04P129F101F1_066.ab1   167 
  294  C BE490613Tu02P129F04P129F101R1_066.ab1   458 
  310    BE490613Tu02P129F04P129F101F1_066.ab1   271 
  394  C BE490613Tu02P129F04P129F101R1_066.ab1   358 
  430    BE490613Tu02P129F04P129F101F1_066.ab1   391 
  614  C BE490613Tu02P129F04P129F101R1_066.ab1   138 
  638    BE490613Tu02P129F04P129F101F1_066.ab1   599 
  658  C BE490613Tu02P129F04P129F101R1_066.ab1    94 
  666    BE490613Tu02P129F04P129F101F1_066.ab1   627 
  702  C BE490613Tu02P129F04P129F101R1_066.ab1    50 
  714    BE490613Tu02P129F04P129F101F1_066.ab1   675 
  730  C BE490613Tu02P129F04P129F101R1_066.ab1    22 
  734    BE490613Tu02P129F04P129F101F1_066.ab1   695 
Contig length: old 792, new 793

Contig length: old 793, new 793
New start: 0