No. words: 1422; after pruning: 1396


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.6 (1,1:1112)  294  0.32 0.00 0.32  BE490651Sn27P003C06P052F051F1_075.ab1      436   744 (0)  C BE490651Sn27P003C06P052F051R1_075.ab1   (0)   678   371 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  150 nodes

 77 str. conn. components

Path
    1    BE490651Sn27P003C06P052F051F1_075.ab1     1 
  539  C BE490651Sn27P003C06P052F051R1_075.ab1   575 
  543    BE490651Sn27P003C06P052F051F1_075.ab1   543 
  547  C BE490651Sn27P003C06P052F051R1_075.ab1   567 
  555    BE490651Sn27P003C06P052F051F1_075.ab1   555 
  575  C BE490651Sn27P003C06P052F051R1_075.ab1   539 
  655    BE490651Sn27P003C06P052F051F1_075.ab1   655 
  659  C BE490651Sn27P003C06P052F051R1_075.ab1   455 
Contig length: old 1113, new 1113

Contig length: old 1113, new 1113
New start: 0