No. words: 1749; after pruning: 1723


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.5 (1,1:1276)  463  0.00 0.00 0.00  BE490651Sn28P003C06P052D051F1_088.ab1      402   873 (0)  C BE490651Sn28P003C06P052D051R1_088.ab1   (0)   876   405 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  236 nodes

 120 str. conn. components

Path
    1    BE490651Sn28P003C06P052D051F1_088.ab1     1 
  648  C BE490651Sn28P003C06P052D051R1_088.ab1   630 
Contig length: old 1277, new 1277

Contig length: old 1277, new 1277
New start: 0