No. words: 1449; after pruning: 1423


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.3 (1,1:1112)  321  0.30 0.00 0.00  BE490651Sn29P003C06P052F051F1_071.ab1      341   676 (0)  C BE490651Sn29P003C06P052F051R1_071.ab1   (0)   773   438 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  166 nodes

 85 str. conn. components

Path
    1    BE490651Sn29P003C06P052F051F1_071.ab1     1 
  476  C BE490651Sn29P003C06P052F051R1_071.ab1   638 
  488    BE490651Sn29P003C06P052F051F1_071.ab1   488 
  492  C BE490651Sn29P003C06P052F051R1_071.ab1   622 
  512    BE490651Sn29P003C06P052F051F1_071.ab1   512 
  536  C BE490651Sn29P003C06P052F051R1_071.ab1   578 
Contig length: old 1113, new 1113

Contig length: old 1113, new 1113
New start: 0