No. words: 1429; after pruning: 1403


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.2 (1,1:1096)  321  0.30 0.00 0.00  BE490651Sn31P003C06P052F051F1_067.ab1      361   692 (0)  C BE490651Sn31P003C06P052F051R1_067.ab1   (0)   737   406 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  164 nodes

 84 str. conn. components

Path
    1    BE490651Sn31P003C06P052F051F1_067.ab1     1 
  436  C BE490651Sn31P003C06P052F051R1_067.ab1   662 
  444    BE490651Sn31P003C06P052F051F1_067.ab1   444 
  464  C BE490651Sn31P003C06P052F051R1_067.ab1   634 
  496    BE490651Sn31P003C06P052F051F1_067.ab1   496 
  500  C BE490651Sn31P003C06P052F051R1_067.ab1   598 
  512    BE490651Sn31P003C06P052F051F1_067.ab1   512 
  520  C BE490651Sn31P003C06P052F051R1_067.ab1   578 
Contig length: old 1097, new 1097

Contig length: old 1097, new 1097
New start: 0