No. words: 1484; after pruning: 1458


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.9 (1,1:1111)  352  0.54 0.00 0.27  BE490651Ta11P003C06P052F051F1_059.ab1      373   744 (0)  C BE490651Ta11P003C06P052F051R1_059.ab1   (0)   740   370 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  178 nodes

 91 str. conn. components

Path
    1    BE490651Ta11P003C06P052F051F1_059.ab1     1 
  455  C BE490651Ta11P003C06P052F051R1_059.ab1   658 
  459    BE490651Ta11P003C06P052F051F1_059.ab1   459 
  475  C BE490651Ta11P003C06P052F051R1_059.ab1   638 
  487    BE490651Ta11P003C06P052F051F1_059.ab1   487 
  491  C BE490651Ta11P003C06P052F051R1_059.ab1   622 
  499    BE490651Ta11P003C06P052F051F1_059.ab1   499 
  503  C BE490651Ta11P003C06P052F051R1_059.ab1   610 
  511    BE490651Ta11P003C06P052F051F1_059.ab1   511 
  535  C BE490651Ta11P003C06P052F051R1_059.ab1   578 
  539    BE490651Ta11P003C06P052F051F1_059.ab1   539 
  547  C BE490651Ta11P003C06P052F051R1_059.ab1   566 
Contig length: old 1112, new 1112

Contig length: old 1112, new 1112
New start: 0