No. words: 1596; after pruning: 1570


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.9 (1,1:1122)  460  0.21 0.00 0.00  BE490651Ta14P003C06P052F051F1_053.ab1      345   817 (0)  C BE490651Ta14P003C06P052F051R1_053.ab1   (0)   779   307 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  234 nodes

 119 str. conn. components

Path
    1    BE490651Ta14P003C06P052F051F1_053.ab1     1 
  577  C BE490651Ta14P003C06P052F051R1_053.ab1   547 
  613    BE490651Ta14P003C06P052F051F1_053.ab1   613 
  621  C BE490651Ta14P003C06P052F051R1_053.ab1   503 
  629    BE490651Ta14P003C06P052F051F1_053.ab1   629 
  633  C BE490651Ta14P003C06P052F051R1_053.ab1   491 
Contig length: old 1123, new 1123

Contig length: old 1123, new 1123
New start: 0