No. words: 1653; after pruning: 1627


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.0 (1,1:1256)  378  0.00 0.00 0.51  BE490651Ta15P003C06P052D051F1_068.ab1      393   788 (0)  C BE490651Ta15P003C06P052D051R1_068.ab1   (0)   865   472 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  194 nodes

 99 str. conn. components

Path
    1    BE490651Ta15P003C06P052D051F1_068.ab1     1 
  548  C BE490651Ta15P003C06P052D051R1_068.ab1   710 
  552    BE490651Ta15P003C06P052D051F1_068.ab1   552 
  556  C BE490651Ta15P003C06P052D051R1_068.ab1   702 
  564    BE490651Ta15P003C06P052D051F1_068.ab1   564 
  576  C BE490651Ta15P003C06P052D051R1_068.ab1   682 
Contig length: old 1257, new 1257

Contig length: old 1257, new 1257
New start: 0