No. words: 1578; after pruning: 1552


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.0 (1,1:1254)  315  0.31 0.00 0.00  BE490651Ta16P003C06P052D051F1_066.ab1      436   758 (0)  C BE490651Ta16P003C06P052D051R1_066.ab1   (0)   820   498 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  160 nodes

 82 str. conn. components

Path
    1    BE490651Ta16P003C06P052D051F1_066.ab1     1 
  579  C BE490651Ta16P003C06P052D051R1_066.ab1   677 
  595    BE490651Ta16P003C06P052D051F1_066.ab1   595 
  599  C BE490651Ta16P003C06P052D051R1_066.ab1   657 
  607    BE490651Ta16P003C06P052D051F1_066.ab1   607 
  611  C BE490651Ta16P003C06P052D051R1_066.ab1   645 
  619    BE490651Ta16P003C06P052D051F1_066.ab1   619 
  627  C BE490651Ta16P003C06P052D051R1_066.ab1   629 
  631    BE490651Ta16P003C06P052D051F1_066.ab1   631 
  639  C BE490651Ta16P003C06P052D051R1_066.ab1   617 
Contig length: old 1255, new 1255

Contig length: old 1255, new 1255
New start: 0