No. words: 1463; after pruning: 1437


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 2.6 (1,1:1112)  314  0.57 0.57 0.57  BE490651Ta16P003C06P052F051F1_049.ab1      333   680 (0)  C BE490651Ta16P003C06P052F051R1_049.ab1   (0)   783   436 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  154 nodes

 79 str. conn. components

Path
    1    BE490651Ta16P003C06P052F051F1_049.ab1     1 
  410  C BE490651Ta16P003C06P052F051R1_049.ab1   704 
  414    BE490651Ta16P003C06P052F051F1_049.ab1   414 
  418  C BE490651Ta16P003C06P052F051R1_049.ab1   696 
  426    BE490651Ta16P003C06P052F051F1_049.ab1   426 
  454  C BE490651Ta16P003C06P052F051R1_049.ab1   660 
  464    BE490651Ta16P003C06P052F051F1_049.ab1   464 
  476  C BE490651Ta16P003C06P052F051R1_049.ab1   638 
Contig length: old 1113, new 1113

Contig length: old 1113, new 1114
New start: 0 
I Change at: 361; seg lengths: entry 1, contig 0