No. words: 490; after pruning: 464


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.1 (1,1:185)  181  0.00 0.00 0.00  BE490651Ta16P038A12P003C121F1_002.ab1        1   186 (60)  C BE490651Ta16P038A12P003C121R1_002.ab1   (58)   186     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  94 nodes

 49 str. conn. components

Path
    1  C BE490651Ta16P038A12P003C121R1_002.ab1   244 
  138    BE490651Ta16P038A12P003C121F1_002.ab1    80 
  142  C BE490651Ta16P038A12P003C121R1_002.ab1   103 
  154    BE490651Ta16P038A12P003C121F1_002.ab1    96 
  162  C BE490651Ta16P038A12P003C121R1_002.ab1    83 
  198    BE490651Ta16P038A12P003C121F1_002.ab1   140 
  202  C BE490651Ta16P038A12P003C121R1_002.ab1    43 
  206    BE490651Ta16P038A12P003C121F1_002.ab1   148 
  214  C BE490651Ta16P038A12P003C121R1_002.ab1    31 
  222    BE490651Ta16P038A12P003C121F1_002.ab1   164 
  230  C BE490651Ta16P038A12P003C121R1_002.ab1    15 
  234    BE490651Ta16P038A12P003C121F1_002.ab1   176 
Contig length: old 304, new 304

Contig length: old 304, new 304
New start: 0