No. words: 1711; after pruning: 1685


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.6 (1,1:1276)  426  0.00 0.00 0.00  BE490651Ta18P003C06P052D051F1_093.ab1      407   840 (0)  C BE490651Ta18P003C06P052D051R1_093.ab1   (0)   871   438 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  218 nodes

 111 str. conn. components

Path
    1    BE490651Ta18P003C06P052D051F1_093.ab1     1 
  554  C BE490651Ta18P003C06P052D051R1_093.ab1   724 
  562    BE490651Ta18P003C06P052D051F1_093.ab1   562 
  590  C BE490651Ta18P003C06P052D051R1_093.ab1   688 
Contig length: old 1277, new 1277

Contig length: old 1277, new 1277
New start: 0