No. words: 1279; after pruning: 1253


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 3.7 (1,1:1102)  169  0.57 0.00 0.00  BE490651Ta18P003C06P052F051F1_062.ab1      484   659 (0)  C BE490651Ta18P003C06P052F051R1_062.ab1   (0)   620   445 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  86 nodes

 45 str. conn. components

Path
    1    BE490651Ta18P003C06P052F051F1_062.ab1     1 
  543  C BE490651Ta18P003C06P052F051R1_062.ab1   561 
  547    BE490651Ta18P003C06P052F051F1_062.ab1   547 
  555  C BE490651Ta18P003C06P052F051R1_062.ab1   549 
  563    BE490651Ta18P003C06P052F051F1_062.ab1   563 
  571  C BE490651Ta18P003C06P052F051R1_062.ab1   533 
  575    BE490651Ta18P003C06P052F051F1_062.ab1   575 
  579  C BE490651Ta18P003C06P052F051R1_062.ab1   525 
Contig length: old 1103, new 1103

Contig length: old 1103, new 1103
New start: 0