No. words: 1619; after pruning: 1593


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    6    0.0 10.2 (1,1:1122)  476  0.20 0.00 0.00  BE490651Ta19P003C06P052F051F1_060.ab1      285   774 (0)  C BE490651Ta19P003C06P052F051R1_060.ab1   (6)   839   350 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  244 nodes

 124 str. conn. components

Path
    1    BE490651Ta19P003C06P052F051F1_060.ab1     1 
  460  C BE490651Ta19P003C06P052F051R1_060.ab1   664 
  464    BE490651Ta19P003C06P052F051F1_060.ab1   464 
  476  C BE490651Ta19P003C06P052F051R1_060.ab1   648 
  496    BE490651Ta19P003C06P052F051F1_060.ab1   496 
  500  C BE490651Ta19P003C06P052F051R1_060.ab1   624 
  512    BE490651Ta19P003C06P052F051F1_060.ab1   512 
  520  C BE490651Ta19P003C06P052F051R1_060.ab1   604 
  524    BE490651Ta19P003C06P052F051F1_060.ab1   524 
  528  C BE490651Ta19P003C06P052F051R1_060.ab1   596 
  532    BE490651Ta19P003C06P052F051F1_060.ab1   532 
  548  C BE490651Ta19P003C06P052F051R1_060.ab1   576 
Contig length: old 1123, new 1123

Contig length: old 1123, new 1123
New start: 0