No. words: 1672; after pruning: 1646


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.4 (1,1:1246)  417  0.00 0.00 0.00  BE490651Ta22P003C06P052D051F1_085.ab1      389   813 (0)  C BE490651Ta22P003C06P052D051R1_085.ab1   (0)   859   435 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  214 nodes

 109 str. conn. components

Path
    1    BE490651Ta22P003C06P052D051F1_085.ab1     1 
  572  C BE490651Ta22P003C06P052D051R1_085.ab1   676 
  576    BE490651Ta22P003C06P052D051F1_085.ab1   576 
  588  C BE490651Ta22P003C06P052D051R1_085.ab1   660 
  600    BE490651Ta22P003C06P052D051F1_085.ab1   600 
  608  C BE490651Ta22P003C06P052D051R1_085.ab1   640 
  620    BE490651Ta22P003C06P052D051F1_085.ab1   620 
  624  C BE490651Ta22P003C06P052D051R1_085.ab1   624 
  628    BE490651Ta22P003C06P052D051F1_085.ab1   628 
  632  C BE490651Ta22P003C06P052D051R1_085.ab1   616 
Contig length: old 1247, new 1247

Contig length: old 1247, new 1247
New start: 0