No. words: 1368; after pruning: 1342


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.5 (1,1:1089)  256  0.72 0.36 0.00  BE490651Ta23P003C06P052F051F1_052.ab1      292   568 (0)  C BE490651Ta23P003C06P052F051R1_052.ab1   (0)   800   523 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  130 nodes

 67 str. conn. components

Path
    1    BE490651Ta23P003C06P052F051F1_052.ab1     1 
  368  C BE490651Ta23P003C06P052F051R1_052.ab1   723 
  372    BE490651Ta23P003C06P052F051F1_052.ab1   372 
  416  C BE490651Ta23P003C06P052F051R1_052.ab1   675 
  424    BE490651Ta23P003C06P052F051F1_052.ab1   424 
  440  C BE490651Ta23P003C06P052F051R1_052.ab1   651 
Contig length: old 1090, new 1090

Contig length: old 1090, new 1090
New start: 0