No. words: 1614; after pruning: 1588


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.1 (1,1:1245)  361  0.00 0.00 0.00  BE490651Td05P003C06P052D051F1_071.ab1      396   763 (0)  C BE490651Td05P003C06P052D051R1_071.ab1   (0)   851   484 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  186 nodes

 95 str. conn. components

Path
    1    BE490651Td05P003C06P052D051F1_071.ab1     1 
  559  C BE490651Td05P003C06P052D051R1_071.ab1   688 
  563    BE490651Td05P003C06P052D051F1_071.ab1   563 
  583  C BE490651Td05P003C06P052D051R1_071.ab1   664 
  603    BE490651Td05P003C06P052D051F1_071.ab1   603 
  607  C BE490651Td05P003C06P052D051R1_071.ab1   640 
Contig length: old 1246, new 1246

Contig length: old 1246, new 1246
New start: 0