No. words: 1702; after pruning: 1676


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.7 (1,1:1256)  435  0.22 0.00 0.00  BE490651Td06P003C06P052D051F1_069.ab1      363   807 (0)  C BE490651Td06P003C06P052D051R1_069.ab1   (0)   895   451 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  222 nodes

 113 str. conn. components

Path
    1    BE490651Td06P003C06P052D051F1_069.ab1     1 
  554  C BE490651Td06P003C06P052D051R1_069.ab1   704 
  558    BE490651Td06P003C06P052D051F1_069.ab1   558 
  562  C BE490651Td06P003C06P052D051R1_069.ab1   696 
  570    BE490651Td06P003C06P052D051F1_069.ab1   570 
  586  C BE490651Td06P003C06P052D051R1_069.ab1   672 
  598    BE490651Td06P003C06P052D051F1_069.ab1   598 
  602  C BE490651Td06P003C06P052D051R1_069.ab1   656 
Contig length: old 1257, new 1257

Contig length: old 1257, new 1257
New start: 0