No. words: 1654; after pruning: 1628


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.7 (1,1:1259)  385  0.00 0.00 0.00  BE490651Td07P003C06P052D051F1_067.ab1      362   755 (0)  C BE490651Td07P003C06P052D051R1_067.ab1   (0)   899   506 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  198 nodes

 101 str. conn. components

Path
    1    BE490651Td07P003C06P052D051F1_067.ab1     1 
  561  C BE490651Td07P003C06P052D051R1_067.ab1   700 
  573    BE490651Td07P003C06P052D051F1_067.ab1   573 
  581  C BE490651Td07P003C06P052D051R1_067.ab1   680 
  585    BE490651Td07P003C06P052D051F1_067.ab1   585 
  593  C BE490651Td07P003C06P052D051R1_067.ab1   668 
  605    BE490651Td07P003C06P052D051F1_067.ab1   605 
  613  C BE490651Td07P003C06P052D051R1_067.ab1   648 
  621    BE490651Td07P003C06P052D051F1_067.ab1   621 
  625  C BE490651Td07P003C06P052D051R1_067.ab1   636 
Contig length: old 1260, new 1260

Contig length: old 1260, new 1260
New start: 0