No. words: 1717; after pruning: 1691


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.6 (1,1:1278)  428  0.23 0.00 0.00  BE490651Td10P003C06P052D051F1_078.ab1      400   837 (0)  C BE490651Td10P003C06P052D051R1_078.ab1   (0)   880   443 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  218 nodes

 111 str. conn. components

Path
    1    BE490651Td10P003C06P052D051F1_078.ab1     1 
  571  C BE490651Td10P003C06P052D051R1_078.ab1   709 
  583    BE490651Td10P003C06P052D051F1_078.ab1   583 
  591  C BE490651Td10P003C06P052D051R1_078.ab1   689 
  603    BE490651Td10P003C06P052D051F1_078.ab1   603 
  607  C BE490651Td10P003C06P052D051R1_078.ab1   673 
Contig length: old 1279, new 1279

Contig length: old 1279, new 1279
New start: 0