No. words: 1056; after pruning: 1016


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 7.5 (1,1:484)  469  0.21 0.00 0.41  BE490662As01P067A03P067A091F1_015.ab1        1   484 (43)  C BE490662As01P067A03P067A091R1_015.ab1   (45)   484     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  234 nodes

 119 str. conn. components

Path
    1  C BE490662As01P067A03P067A091R1_015.ab1   529 
   57    BE490662As01P067A03P067A091F1_015.ab1    12 
   61  C BE490662As01P067A03P067A091R1_015.ab1   469 
   77    BE490662As01P067A03P067A091F1_015.ab1    32 
   85  C BE490662As01P067A03P067A091R1_015.ab1   445 
   93    BE490662As01P067A03P067A091F1_015.ab1    48 
  113  C BE490662As01P067A03P067A091R1_015.ab1   417 
  177    BE490662As01P067A03P067A091F1_015.ab1   132 
  181  C BE490662As01P067A03P067A091R1_015.ab1   349 
  193    BE490662As01P067A03P067A091F1_015.ab1   148 
  313  C BE490662As01P067A03P067A091R1_015.ab1   217 
  373    BE490662As01P067A03P067A091F1_015.ab1   328 
  417  C BE490662As01P067A03P067A091R1_015.ab1   113 
  429    BE490662As01P067A03P067A091F1_015.ab1   384 
  437  C BE490662As01P067A03P067A091R1_015.ab1    93 
  458    BE490662As01P067A03P067A091F1_015.ab1   413 
  466  C BE490662As01P067A03P067A091R1_015.ab1    64 
  478    BE490662As01P067A03P067A091F1_015.ab1   433 
Contig length: old 571, new 572

Contig length: old 572, new 572
New start: 0