No. words: 1032; after pruning: 978


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 8.4 (1,1:485)  468  0.41 0.21 0.21  BE490662As02P067A03P067A091F1_013.ab1        1   483 (28)  C BE490662As02P067A03P067A091R1_013.ab1   (35)   486     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  232 nodes

 118 str. conn. components

Path
    1  C BE490662As02P067A03P067A091R1_013.ab1   521 
   51    BE490662As02P067A03P067A091F1_013.ab1    15 
   60  C BE490662As02P067A03P067A091R1_013.ab1   462 
   68    BE490662As02P067A03P067A091F1_013.ab1    32 
  108  C BE490662As02P067A03P067A091R1_013.ab1   414 
  172    BE490662As02P067A03P067A091F1_013.ab1   136 
  180  C BE490662As02P067A03P067A091R1_013.ab1   342 
  192    BE490662As02P067A03P067A091F1_013.ab1   156 
  212  C BE490662As02P067A03P067A091R1_013.ab1   310 
  272    BE490662As02P067A03P067A091F1_013.ab1   236 
  316  C BE490662As02P067A03P067A091R1_013.ab1   206 
  380    BE490662As02P067A03P067A091F1_013.ab1   344 
  416  C BE490662As02P067A03P067A091R1_013.ab1   106 
  428    BE490662As02P067A03P067A091F1_013.ab1   392 
  436  C BE490662As02P067A03P067A091R1_013.ab1    86 
  456    BE490662As02P067A03P067A091F1_013.ab1   420 
  464  C BE490662As02P067A03P067A091R1_013.ab1    58 
  480    BE490662As02P067A03P067A091F1_013.ab1   444 
  484  C BE490662As02P067A03P067A091R1_013.ab1    38 
  488    BE490662As02P067A03P067A091F1_013.ab1   452 
Contig length: old 546, new 547

Contig length: old 547, new 547
New start: 0