No. words: 1094; after pruning: 1054


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 5.3 (1,1:432)  411  0.93 0.00 0.23  BE490662Ld03P067A03P067A091F1_070.ab1        1   430 (85)  C BE490662Ld03P067A03P067A091R1_070.ab1   (147)   432     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  202 nodes

 103 str. conn. components

Path
    1  C BE490662Ld03P067A03P067A091R1_070.ab1   579 
  155    BE490662Ld03P067A03P067A091F1_070.ab1     8 
  164  C BE490662Ld03P067A03P067A091R1_070.ab1   416 
  172    BE490662Ld03P067A03P067A091F1_070.ab1    25 
  176  C BE490662Ld03P067A03P067A091R1_070.ab1   404 
  220    BE490662Ld03P067A03P067A091F1_070.ab1    73 
  224  C BE490662Ld03P067A03P067A091R1_070.ab1   356 
  273    BE490662Ld03P067A03P067A091F1_070.ab1   126 
  309  C BE490662Ld03P067A03P067A091R1_070.ab1   271 
  325    BE490662Ld03P067A03P067A091F1_070.ab1   178 
  365  C BE490662Ld03P067A03P067A091R1_070.ab1   215 
  377    BE490662Ld03P067A03P067A091F1_070.ab1   230 
  385  C BE490662Ld03P067A03P067A091R1_070.ab1   195 
  413    BE490662Ld03P067A03P067A091F1_070.ab1   266 
  417  C BE490662Ld03P067A03P067A091R1_070.ab1   163 
  425    BE490662Ld03P067A03P067A091F1_070.ab1   278 
  429  C BE490662Ld03P067A03P067A091R1_070.ab1   151 
  461    BE490662Ld03P067A03P067A091F1_070.ab1   314 
  469  C BE490662Ld03P067A03P067A091R1_070.ab1   111 
  477    BE490662Ld03P067A03P067A091F1_070.ab1   330 
  481  C BE490662Ld03P067A03P067A091R1_070.ab1    99 
  485    BE490662Ld03P067A03P067A091F1_070.ab1   338 
  493  C BE490662Ld03P067A03P067A091R1_070.ab1    87 
  525    BE490662Ld03P067A03P067A091F1_070.ab1   378 
  541  C BE490662Ld03P067A03P067A091R1_070.ab1    39 
  553    BE490662Ld03P067A03P067A091F1_070.ab1   406 
  567  C BE490662Ld03P067A03P067A091R1_070.ab1    14 
  571    BE490662Ld03P067A03P067A091F1_070.ab1   424 
Contig length: old 661, new 662

Contig length: old 662, new 662
New start: 0