No. words: 866; after pruning: 826


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    5    0.0 3.8 (1,1:439)  388  0.95 0.24 0.71  BE490662Ld06P067A03P067A091F1_095.ab1       15   435 (5)  C BE490662Ld06P067A03P067A091R1_095.ab1   (0)   426     8 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 5       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  188 nodes

 96 str. conn. components

Path
    1    BE490662Ld06P067A03P067A091F1_095.ab1     1 
  135  C BE490662Ld06P067A03P067A091R1_095.ab1   306 
  139    BE490662Ld06P067A03P067A091F1_095.ab1   139 
  199  C BE490662Ld06P067A03P067A091R1_095.ab1   242 
  211    BE490662Ld06P067A03P067A091F1_095.ab1   211 
  251  C BE490662Ld06P067A03P067A091R1_095.ab1   190 
  311    BE490662Ld06P067A03P067A091F1_095.ab1   311 
  315  C BE490662Ld06P067A03P067A091R1_095.ab1   126 
  419    BE490662Ld06P067A03P067A091F1_095.ab1   420 
Contig length: old 440, new 439

Contig length: old 439, new 440
New start: 0 
I Change at: 418; seg lengths: entry 1, contig 0