No. words: 1168; after pruning: 1128


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 8.3 (1,1:432)  420  0.23 0.00 0.23  BE490662Ld07P067A03P067A091F1_093.ab1        1   430 (161)  C BE490662Ld07P067A03P067A091R1_093.ab1   (145)   432     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  212 nodes

 108 str. conn. components

Path
    1  C BE490662Ld07P067A03P067A091R1_093.ab1   577 
  153    BE490662Ld07P067A03P067A091F1_093.ab1     8 
  162  C BE490662Ld07P067A03P067A091R1_093.ab1   416 
  170    BE490662Ld07P067A03P067A091F1_093.ab1    25 
  186  C BE490662Ld07P067A03P067A091R1_093.ab1   392 
  194    BE490662Ld07P067A03P067A091F1_093.ab1    49 
  214  C BE490662Ld07P067A03P067A091R1_093.ab1   364 
  218    BE490662Ld07P067A03P067A091F1_093.ab1    73 
  230  C BE490662Ld07P067A03P067A091R1_093.ab1   348 
  282    BE490662Ld07P067A03P067A091F1_093.ab1   137 
  314  C BE490662Ld07P067A03P067A091R1_093.ab1   264 
  366    BE490662Ld07P067A03P067A091F1_093.ab1   221 
  386  C BE490662Ld07P067A03P067A091R1_093.ab1   192 
  390    BE490662Ld07P067A03P067A091F1_093.ab1   245 
  398  C BE490662Ld07P067A03P067A091R1_093.ab1   180 
  454    BE490662Ld07P067A03P067A091F1_093.ab1   309 
  494  C BE490662Ld07P067A03P067A091R1_093.ab1    84 
  510    BE490662Ld07P067A03P067A091F1_093.ab1   365 
  514  C BE490662Ld07P067A03P067A091R1_093.ab1    64 
  534    BE490662Ld07P067A03P067A091F1_093.ab1   389 
  538  C BE490662Ld07P067A03P067A091R1_093.ab1    40 
  542    BE490662Ld07P067A03P067A091F1_093.ab1   397 
Contig length: old 735, new 736

Contig length: old 736, new 736
New start: 0