No. words: 1002; after pruning: 976


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 9.4 (1,1:475)  446  0.00 0.21 0.00  BE490744As02P067F02P067F081F1_070.ab1        3   475 (42)  C BE490744As02P067F02P067F081R1_070.ab1   (11)   474     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  236 nodes

 120 str. conn. components

Path
    1  C BE490744As02P067F02P067F081R1_070.ab1   485 
   19    BE490744As02P067F02P067F081F1_070.ab1    10 
   23  C BE490744As02P067F02P067F081R1_070.ab1   463 
   43    BE490744As02P067F02P067F081F1_070.ab1    34 
   59  C BE490744As02P067F02P067F081R1_070.ab1   427 
   63    BE490744As02P067F02P067F081F1_070.ab1    54 
   75  C BE490744As02P067F02P067F081R1_070.ab1   411 
   79    BE490744As02P067F02P067F081F1_070.ab1    70 
  111  C BE490744As02P067F02P067F081R1_070.ab1   375 
  119    BE490744As02P067F02P067F081F1_070.ab1   110 
  407  C BE490744As02P067F02P067F081R1_070.ab1    79 
  415    BE490744As02P067F02P067F081F1_070.ab1   406 
  423  C BE490744As02P067F02P067F081R1_070.ab1    63 
  427    BE490744As02P067F02P067F081F1_070.ab1   418 
Contig length: old 526, new 526

Contig length: old 526, new 526
New start: 0